ABC.5: open coding and tutorials, single cell dimensionality reduction
scanpy
projection
PCA
UMAP
ABC.5: try our previous tutorials or a workshop on dimensionality reduction
Slides
Today’s slides
Tutorials
You can try our previous tutorials by looking at the Documentation page, or try a workshop one of us have been giving at the scVerse 2024 conference in Munich. The workshop is about dimensionality reduction methods for single cell data and contains a jupyter notebook to run python code on Google Colab.